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Search: id:A062204
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A062204 Alignments of a block of n strings of length 7 in a 7n X n array. +0
3
0, 2, 48639, 27684885930, 2428201330563124632, 12374447477223004925451095189, 518707652795611369601687881012709471402, 84188858643128915756437913018700571348711430340961 (list; graph; listen)
OFFSET

0,2

COMMENT

Strings of length 7 represent the average word length for most natural languages such as English. This sequence represents the search space for alignment and sequencing algorithms that work on multiple sets of strings.

REFERENCES

M. S. Waterman, Introduction to Computational Biology: Maps, Sequences and Genomes, 1995.

LINKS

M. A. Covington, The number of distinct alignments of two strings, (pdf, ps), Journal of Quantitative Linguistics, Volume 11, no. 3 (2004), 173-182.

M. S. Waterman, Home Page (contains copies of his papers)

FORMULA

A(n, y)= Sum_{k=0, 1, ..., y} ((ny-k)!/(k!((y-k)!)^n)) with y=7.

EXAMPLE

A(2,7) = 48639 since this represents the number of unique alignments of 2 strings of length 7. All values in A(2,X) can be cross-validated against the Delannoy sequence D(X,X) A001850.

CROSSREFS

Cf. A062205, A062208, A001850. A(2, X) represents Waterman's f function.

Adjacent sequences: A062201 A062202 A062203 this_sequence A062205 A062206 A062207

Sequence in context: A055578 A106025 A094213 this_sequence A059764 A052427 A051833

KEYWORD

nonn

AUTHOR

Angelo Dalli (adal002(AT)um.edu.mt), Jun 13 2001

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Last modified May 16 23:01 EDT 2008. Contains 139884 sequences.


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